It means that the object is constructed by packing a lot of objects against each other creating interior shared faces. What it should be doing is unioning these objects such that there is one “water-tight” body with a single interior void. Having a body with internal faces cutting through is an invalid / non-manifold situation. Because there are many ways to interpret this condition, each slicer may or may not process it properly.
Do you know how I could get OpenSCAD to conform? Maybe ask it to bleed epsilon into neighboring shapess? I thought the union operator would take care of detecting such things, but I guess it’s not that obvious.